Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
ATP6V1AP38606 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
ATP6V1AP38606 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
ATP6V1AP38606 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC23.46■■□□□ 1.35
ATP6V1AP38606 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.46■■□□□ 1.35
ATP6V1AP38606 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.46■■□□□ 1.35
ATP6V1AP38606 GZMM-202ENST00000592501 941 ntTSL 3 BASIC23.46■■□□□ 1.35
ATP6V1AP38606 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
ATP6V1AP38606 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
ATP6V1AP38606 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.45■■□□□ 1.35
ATP6V1AP38606 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
ATP6V1AP38606 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC23.45■■□□□ 1.35
ATP6V1AP38606 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
ATP6V1AP38606 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
ATP6V1AP38606 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.45■■□□□ 1.34
ATP6V1AP38606 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
ATP6V1AP38606 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
ATP6V1AP38606 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 USP48-205ENST00000421625 2818 ntTSL 2 BASIC23.45■■□□□ 1.34
ATP6V1AP38606 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.45■■□□□ 1.34
ATP6V1AP38606 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
ATP6V1AP38606 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 MIR149-201ENST00000384879 89 ntBASIC23.44■■□□□ 1.34
ATP6V1AP38606 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 AL158211.5-201ENST00000623583 2518 ntBASIC23.44■■□□□ 1.34
ATP6V1AP38606 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
ATP6V1AP38606 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
ATP6V1AP38606 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 RPS2P28-201ENST00000314255 741 ntBASIC23.43■■□□□ 1.34
ATP6V1AP38606 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 ME2-218ENST00000640965 2476 ntTSL 5 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 UROS-202ENST00000368778 1556 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.43■■□□□ 1.34
ATP6V1AP38606 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
ATP6V1AP38606 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
ATP6V1AP38606 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATP6V1AP38606 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATP6V1AP38606 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
ATP6V1AP38606 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms