Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT20P35900 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
KRT20P35900 FEM1AP3-201ENST00000403722 1741 ntBASIC17.57■□□□□ 0.4
KRT20P35900 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.57■□□□□ 0.4
KRT20P35900 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.57■□□□□ 0.4
KRT20P35900 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
KRT20P35900 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.56■□□□□ 0.4
KRT20P35900 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT20P35900 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.56■□□□□ 0.4
KRT20P35900 AL596275.1-201ENST00000423464 877 ntBASIC17.56■□□□□ 0.4
KRT20P35900 RBM17P1-201ENST00000453646 1190 ntBASIC17.56■□□□□ 0.4
KRT20P35900 AC008040.2-201ENST00000461049 708 ntBASIC17.56■□□□□ 0.4
KRT20P35900 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT20P35900 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.56■□□□□ 0.4
KRT20P35900 CKBP1-201ENST00000565489 1086 ntBASIC17.56■□□□□ 0.4
KRT20P35900 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.56■□□□□ 0.4
KRT20P35900 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
KRT20P35900 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.56■□□□□ 0.4
KRT20P35900 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT20P35900 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
KRT20P35900 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.56■□□□□ 0.4
KRT20P35900 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
KRT20P35900 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
KRT20P35900 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.55■□□□□ 0.4
KRT20P35900 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 AL355075.4-201ENST00000554988 638 ntBASIC17.55■□□□□ 0.4
KRT20P35900 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.55■□□□□ 0.4
KRT20P35900 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.55■□□□□ 0.4
KRT20P35900 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
KRT20P35900 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT20P35900 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
KRT20P35900 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT20P35900 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms