Protein–RNA interactions for Protein: P28221

HTR1D, 5-hydroxytryptamine receptor 1D, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1DP28221 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
HTR1DP28221 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.12■□□□□ 0.01
HTR1DP28221 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
HTR1DP28221 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC15.12■□□□□ 0.01
HTR1DP28221 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
HTR1DP28221 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.12■□□□□ 0.01
HTR1DP28221 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.12■□□□□ 0.01
HTR1DP28221 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.12■□□□□ 0.01
HTR1DP28221 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.12■□□□□ 0.01
HTR1DP28221 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
HTR1DP28221 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.12■□□□□ 0.01
HTR1DP28221 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.12■□□□□ 0.01
HTR1DP28221 AC140113.3-201ENST00000605663 199 ntBASIC15.12■□□□□ 0.01
HTR1DP28221 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC15.12■□□□□ 0.01
HTR1DP28221 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
HTR1DP28221 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC15.12■□□□□ 0.01
HTR1DP28221 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
HTR1DP28221 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC15.11■□□□□ 0.01
HTR1DP28221 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.11■□□□□ 0.01
HTR1DP28221 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC15.11■□□□□ 0.01
HTR1DP28221 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC15.11■□□□□ 0.01
HTR1DP28221 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
HTR1DP28221 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.11■□□□□ 0.01
HTR1DP28221 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC15.11■□□□□ 0.01
HTR1DP28221 KRT18P23-201ENST00000435622 1283 ntBASIC15.11■□□□□ 0.01
HTR1DP28221 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC15.11■□□□□ 0.01
HTR1DP28221 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.11■□□□□ 0.01
HTR1DP28221 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.11■□□□□ 0.01
HTR1DP28221 COX11P1-201ENST00000489116 835 ntBASIC15.11■□□□□ 0.01
HTR1DP28221 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC15.11■□□□□ 0.01
HTR1DP28221 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.11■□□□□ 0.01
HTR1DP28221 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC15.11■□□□□ 0.01
HTR1DP28221 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
HTR1DP28221 AC112497.1-201ENST00000624824 639 ntBASIC15.11■□□□□ 0.01
HTR1DP28221 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.11■□□□□ 0.01
HTR1DP28221 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.11■□□□□ 0.01
HTR1DP28221 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.11■□□□□ 0.01
HTR1DP28221 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
HTR1DP28221 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
HTR1DP28221 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.1■□□□□ 0.01
HTR1DP28221 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.1■□□□□ 0.01
HTR1DP28221 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
HTR1DP28221 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.1■□□□□ 0.01
HTR1DP28221 AC112777.1-201ENST00000540175 1423 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 HOXB1-202ENST00000577092 1414 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 AC073508.3-201ENST00000619697 1419 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
HTR1DP28221 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC15.1■□□□□ 0.01
HTR1DP28221 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 CROCCP3-202ENST00000420820 1947 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 ANO7L1-203ENST00000602586 1720 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.1■□□□□ 0.01
HTR1DP28221 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 AP000593.1-201ENST00000393668 712 ntBASIC15.1■□□□□ 0.01
HTR1DP28221 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
HTR1DP28221 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms