Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT3P12035 HMGA1P5-201ENST00000412453 271 ntBASIC19.44■□□□□ 0.7
KRT3P12035 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.44■□□□□ 0.7
KRT3P12035 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT3P12035 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.44■□□□□ 0.7
KRT3P12035 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT3P12035 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC19.44■□□□□ 0.7
KRT3P12035 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT3P12035 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.44■□□□□ 0.7
KRT3P12035 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
KRT3P12035 KRT18P22-201ENST00000402024 1347 ntBASIC19.44■□□□□ 0.7
KRT3P12035 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
KRT3P12035 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT3P12035 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT3P12035 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT3P12035 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.43■□□□□ 0.7
KRT3P12035 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.43■□□□□ 0.7
KRT3P12035 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 AL512604.3-201ENST00000569583 964 ntBASIC19.43■□□□□ 0.7
KRT3P12035 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT3P12035 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.43■□□□□ 0.7
KRT3P12035 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
KRT3P12035 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT3P12035 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
KRT3P12035 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT3P12035 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.43■□□□□ 0.7
KRT3P12035 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
KRT3P12035 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
KRT3P12035 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT3P12035 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
KRT3P12035 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT3P12035 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT3P12035 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.42■□□□□ 0.7
KRT3P12035 TMA16-209ENST00000513272 803 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT3P12035 NAT14-202ENST00000587400 416 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT3P12035 AC112497.1-201ENST00000624824 639 ntBASIC19.42■□□□□ 0.7
KRT3P12035 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.42■□□□□ 0.7
KRT3P12035 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
KRT3P12035 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.42■□□□□ 0.7
KRT3P12035 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
KRT3P12035 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 AL163051.1-201ENST00000569214 1512 ntBASIC19.41■□□□□ 0.7
KRT3P12035 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
KRT3P12035 AL162741.1-201ENST00000565563 1558 ntBASIC19.41■□□□□ 0.7
KRT3P12035 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
KRT3P12035 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 AL390961.4-201ENST00000623958 2535 ntBASIC19.41■□□□□ 0.7
KRT3P12035 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.41■□□□□ 0.7
KRT3P12035 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT3P12035 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT3P12035 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT3P12035 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT3P12035 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.41■□□□□ 0.7
KRT3P12035 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.41■□□□□ 0.7
KRT3P12035 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.41■□□□□ 0.7
KRT3P12035 AC145285.6-201ENST00000604632 637 ntBASIC19.41■□□□□ 0.7
KRT3P12035 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
KRT3P12035 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms