Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 AL354751.1-201ENST00000412768 1863 ntBASIC18.18■□□□□ 0.5
CAPN1P07384 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CAPN1P07384 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CAPN1P07384 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.17■□□□□ 0.5
CAPN1P07384 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.17■□□□□ 0.5
CAPN1P07384 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.17■□□□□ 0.5
CAPN1P07384 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 AC006011.2-201ENST00000621313 1158 ntBASIC18.17■□□□□ 0.5
CAPN1P07384 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.17■□□□□ 0.5
CAPN1P07384 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
CAPN1P07384 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
CAPN1P07384 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CAPN1P07384 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CAPN1P07384 AC018470.1-201ENST00000624790 3129 ntBASIC18.16■□□□□ 0.5
CAPN1P07384 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN1P07384 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.16■□□□□ 0.5
CAPN1P07384 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CAPN1P07384 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN1P07384 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.16■□□□□ 0.5
CAPN1P07384 DUX4L26-201ENST00000489078 1255 ntBASIC18.16■□□□□ 0.5
CAPN1P07384 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN1P07384 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CAPN1P07384 AL023803.3-201ENST00000615559 522 ntBASIC18.16■□□□□ 0.5
CAPN1P07384 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.16■□□□□ 0.5
CAPN1P07384 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CAPN1P07384 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CAPN1P07384 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.16■□□□□ 0.5
CAPN1P07384 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.16■□□□□ 0.5
CAPN1P07384 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.15■□□□□ 0.5
CAPN1P07384 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CAPN1P07384 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN1P07384 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN1P07384 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CAPN1P07384 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN1P07384 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.15■□□□□ 0.5
CAPN1P07384 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CAPN1P07384 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 ARMC10P1-201ENST00000313754 855 ntBASIC18.15■□□□□ 0.5
CAPN1P07384 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.15■□□□□ 0.5
CAPN1P07384 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CAPN1P07384 SLC25A1P2-201ENST00000430693 912 ntBASIC18.15■□□□□ 0.5
CAPN1P07384 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.15■□□□□ 0.5
CAPN1P07384 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC18.15■□□□□ 0.5
CAPN1P07384 AC116562.4-202ENST00000641738 218 ntBASIC18.15■□□□□ 0.5
CAPN1P07384 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CAPN1P07384 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms