Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 LINC01126-201ENST00000623515 1646 ntBASIC22.15■■□□□ 1.14
COL1A1P02452 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.15■■□□□ 1.14
COL1A1P02452 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 MRPL3P1-201ENST00000400109 1033 ntBASIC22.15■■□□□ 1.14
COL1A1P02452 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.15■■□□□ 1.14
COL1A1P02452 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 SAPCD2P3-201ENST00000455031 850 ntBASIC22.15■■□□□ 1.14
COL1A1P02452 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC22.15■■□□□ 1.14
COL1A1P02452 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.15■■□□□ 1.14
COL1A1P02452 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
COL1A1P02452 TPM1-218ENST00000559281 851 ntTSL 5 BASIC22.15■■□□□ 1.14
COL1A1P02452 AC005336.2-201ENST00000593183 939 ntBASIC22.15■■□□□ 1.14
COL1A1P02452 AC099336.1-202ENST00000602961 463 ntBASIC22.15■■□□□ 1.14
COL1A1P02452 IGHV3-41-201ENST00000613121 348 ntBASIC22.15■■□□□ 1.14
COL1A1P02452 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
COL1A1P02452 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC22.14■■□□□ 1.14
COL1A1P02452 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL1A1P02452 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
COL1A1P02452 NSUN5P1-202ENST00000421140 1535 ntBASIC22.14■■□□□ 1.14
COL1A1P02452 NSUN5P2-203ENST00000457352 1529 ntBASIC22.14■■□□□ 1.14
COL1A1P02452 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC22.14■■□□□ 1.14
COL1A1P02452 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A1P02452 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A1P02452 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC22.14■■□□□ 1.13
COL1A1P02452 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC22.14■■□□□ 1.13
COL1A1P02452 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A1P02452 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A1P02452 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC22.14■■□□□ 1.13
COL1A1P02452 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
COL1A1P02452 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC22.14■■□□□ 1.13
COL1A1P02452 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC22.14■■□□□ 1.13
COL1A1P02452 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
COL1A1P02452 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
COL1A1P02452 AC112777.1-201ENST00000540175 1423 ntBASIC22.14■■□□□ 1.13
COL1A1P02452 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.13■■□□□ 1.13
COL1A1P02452 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC22.13■■□□□ 1.13
COL1A1P02452 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.13■■□□□ 1.13
COL1A1P02452 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.13■■□□□ 1.13
COL1A1P02452 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.13■■□□□ 1.13
COL1A1P02452 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC22.13■■□□□ 1.13
COL1A1P02452 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 AL671883.3-201ENST00000603274 991 ntBASIC22.13■■□□□ 1.13
COL1A1P02452 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.13■■□□□ 1.13
COL1A1P02452 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
COL1A1P02452 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC22.13■■□□□ 1.13
COL1A1P02452 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
COL1A1P02452 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A1P02452 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A1P02452 AL031598.1-201ENST00000561511 1773 ntBASIC22.12■■□□□ 1.13
COL1A1P02452 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL1A1P02452 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A1P02452 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A1P02452 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.12■■□□□ 1.13
COL1A1P02452 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
COL1A1P02452 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
COL1A1P02452 ABR-204ENST00000543210 1049 ntTSL 2 BASIC22.12■■□□□ 1.13
COL1A1P02452 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
COL1A1P02452 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC22.12■■□□□ 1.13
COL1A1P02452 BNIP3P18-201ENST00000593976 575 ntBASIC22.12■■□□□ 1.13
COL1A1P02452 AC120114.3-201ENST00000611923 658 ntBASIC22.12■■□□□ 1.13
COL1A1P02452 REXO1L6P-202ENST00000619970 1078 ntBASIC22.12■■□□□ 1.13
COL1A1P02452 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A1P02452 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.12■■□□□ 1.13
COL1A1P02452 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
COL1A1P02452 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
COL1A1P02452 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
COL1A1P02452 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
COL1A1P02452 VENTXP7-201ENST00000475503 772 ntBASIC22.11■■□□□ 1.13
COL1A1P02452 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
COL1A1P02452 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
COL1A1P02452 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC22.11■■□□□ 1.13
COL1A1P02452 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC22.11■■□□□ 1.13
COL1A1P02452 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
COL1A1P02452 HLA-A-201ENST00000376802 1334 ntBASIC22.11■■□□□ 1.13
COL1A1P02452 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms