Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL138831.2-201ENST00000606564 490 ntBASIC18.49■□□□□ 0.55
PDGFBP01127 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PDGFBP01127 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PDGFBP01127 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 AC099778.1-201ENST00000568593 1911 ntBASIC18.49■□□□□ 0.55
PDGFBP01127 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDGFBP01127 KRT8P50-201ENST00000562022 1438 ntBASIC18.49■□□□□ 0.55
PDGFBP01127 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFBP01127 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDGFBP01127 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
PDGFBP01127 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFBP01127 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC18.48■□□□□ 0.55
PDGFBP01127 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.48■□□□□ 0.55
PDGFBP01127 COX20P2-201ENST00000452636 358 ntBASIC18.48■□□□□ 0.55
PDGFBP01127 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.48■□□□□ 0.55
PDGFBP01127 HLA-J-203ENST00000494367 1087 ntBASIC18.48■□□□□ 0.55
PDGFBP01127 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 YBX1P5-201ENST00000509441 847 ntBASIC18.48■□□□□ 0.55
PDGFBP01127 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC18.48■□□□□ 0.55
PDGFBP01127 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.48■□□□□ 0.55
PDGFBP01127 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.48■□□□□ 0.55
PDGFBP01127 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDGFBP01127 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.48■□□□□ 0.55
PDGFBP01127 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
PDGFBP01127 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
PDGFBP01127 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC18.47■□□□□ 0.55
PDGFBP01127 MCCD1P2-201ENST00000423228 335 ntBASIC18.47■□□□□ 0.55
PDGFBP01127 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.47■□□□□ 0.55
PDGFBP01127 AL139288.1-201ENST00000623748 933 ntBASIC18.47■□□□□ 0.55
PDGFBP01127 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC18.47■□□□□ 0.55
PDGFBP01127 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDGFBP01127 AC099343.3-201ENST00000605834 2503 ntBASIC18.47■□□□□ 0.55
PDGFBP01127 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
PDGFBP01127 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.47■□□□□ 0.55
PDGFBP01127 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.46■□□□□ 0.55
PDGFBP01127 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.46■□□□□ 0.55
PDGFBP01127 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
PDGFBP01127 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC18.46■□□□□ 0.55
PDGFBP01127 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 AC011467.4-201ENST00000594891 528 ntBASIC18.46■□□□□ 0.55
PDGFBP01127 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.46■□□□□ 0.55
PDGFBP01127 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC18.46■□□□□ 0.55
PDGFBP01127 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.46■□□□□ 0.55
PDGFBP01127 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDGFBP01127 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDGFBP01127 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PDGFBP01127 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFBP01127 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.45■□□□□ 0.54
PDGFBP01127 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFBP01127 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFBP01127 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC18.45■□□□□ 0.54
PDGFBP01127 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDGFBP01127 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms