Protein–RNA interactions for Protein: O14521

SDHD, Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial, humanhuman

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHDO14521 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHDO14521 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SDHDO14521 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHDO14521 GMCL1P1-201ENST00000463439 1581 ntBASIC17.84■□□□□ 0.45
SDHDO14521 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHDO14521 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SDHDO14521 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SDHDO14521 MIR564-202ENST00000385049 94 ntBASIC17.84■□□□□ 0.45
SDHDO14521 AP000593.1-201ENST00000393668 712 ntBASIC17.84■□□□□ 0.45
SDHDO14521 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHDO14521 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHDO14521 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SDHDO14521 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.84■□□□□ 0.45
SDHDO14521 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SDHDO14521 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SDHDO14521 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.84■□□□□ 0.45
SDHDO14521 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
SDHDO14521 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.83■□□□□ 0.45
SDHDO14521 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHDO14521 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SDHDO14521 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.83■□□□□ 0.45
SDHDO14521 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHDO14521 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.83■□□□□ 0.45
SDHDO14521 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
SDHDO14521 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
SDHDO14521 KRT16P1-201ENST00000399124 1418 ntBASIC17.83■□□□□ 0.45
SDHDO14521 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
SDHDO14521 AL645608.8-201ENST00000606034 2086 ntBASIC17.83■□□□□ 0.45
SDHDO14521 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.83■□□□□ 0.45
SDHDO14521 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SDHDO14521 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.83■□□□□ 0.44
SDHDO14521 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.83■□□□□ 0.44
SDHDO14521 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
SDHDO14521 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.83■□□□□ 0.44
SDHDO14521 AC026271.3-201ENST00000571884 352 ntBASIC17.83■□□□□ 0.44
SDHDO14521 RN7SL471P-201ENST00000580476 299 ntBASIC17.83■□□□□ 0.44
SDHDO14521 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.83■□□□□ 0.44
SDHDO14521 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SDHDO14521 AC130371.2-201ENST00000619443 611 ntBASIC17.83■□□□□ 0.44
SDHDO14521 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.83■□□□□ 0.44
SDHDO14521 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SDHDO14521 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
SDHDO14521 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SDHDO14521 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.83■□□□□ 0.44
SDHDO14521 KRT8P50-201ENST00000562022 1438 ntBASIC17.82■□□□□ 0.44
SDHDO14521 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SDHDO14521 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.82■□□□□ 0.44
SDHDO14521 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.82■□□□□ 0.44
SDHDO14521 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 AC012317.2-201ENST00000623305 2251 ntBASIC17.82■□□□□ 0.44
SDHDO14521 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHDO14521 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 FAM207BP-201ENST00000447172 505 ntBASIC17.82■□□□□ 0.44
SDHDO14521 AC011506.1-201ENST00000474329 610 ntBASIC17.82■□□□□ 0.44
SDHDO14521 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.82■□□□□ 0.44
SDHDO14521 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.82■□□□□ 0.44
SDHDO14521 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.82■□□□□ 0.44
SDHDO14521 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SDHDO14521 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SDHDO14521 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
SDHDO14521 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
SDHDO14521 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SDHDO14521 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SDHDO14521 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.81■□□□□ 0.44
SDHDO14521 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDHDO14521 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDHDO14521 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SDHDO14521 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.81■□□□□ 0.44
SDHDO14521 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SDHDO14521 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms