Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 AL163051.1-201ENST00000569214 1512 ntBASIC18.65■□□□□ 0.58
AP3B1O00203 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.65■□□□□ 0.58
AP3B1O00203 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
AP3B1O00203 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.65■□□□□ 0.58
AP3B1O00203 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.65■□□□□ 0.58
AP3B1O00203 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.65■□□□□ 0.58
AP3B1O00203 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
AP3B1O00203 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
AP3B1O00203 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.65■□□□□ 0.58
AP3B1O00203 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
AP3B1O00203 AC009102.3-201ENST00000623118 1491 ntBASIC18.65■□□□□ 0.58
AP3B1O00203 HTR7P1-202ENST00000624664 4411 ntBASIC18.65■□□□□ 0.58
AP3B1O00203 OR6D1P-202ENST00000641007 5290 ntBASIC18.65■□□□□ 0.58
AP3B1O00203 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3B1O00203 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3B1O00203 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
AP3B1O00203 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
AP3B1O00203 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3B1O00203 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
AP3B1O00203 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3B1O00203 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.64■□□□□ 0.57
AP3B1O00203 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
AP3B1O00203 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.64■□□□□ 0.57
AP3B1O00203 MIR4674-201ENST00000582457 87 ntBASIC18.64■□□□□ 0.57
AP3B1O00203 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.64■□□□□ 0.57
AP3B1O00203 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.64■□□□□ 0.57
AP3B1O00203 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
AP3B1O00203 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
AP3B1O00203 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
AP3B1O00203 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.64■□□□□ 0.57
AP3B1O00203 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP3B1O00203 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
AP3B1O00203 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
AP3B1O00203 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
AP3B1O00203 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3B1O00203 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.63■□□□□ 0.57
AP3B1O00203 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
AP3B1O00203 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 NOC2LP2-201ENST00000407594 1944 ntBASIC18.63■□□□□ 0.57
AP3B1O00203 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.63■□□□□ 0.57
AP3B1O00203 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 TSPY7P-201ENST00000431358 1114 ntBASIC18.63■□□□□ 0.57
AP3B1O00203 KRT18P23-201ENST00000435622 1283 ntBASIC18.63■□□□□ 0.57
AP3B1O00203 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.63■□□□□ 0.57
AP3B1O00203 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.63■□□□□ 0.57
AP3B1O00203 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3B1O00203 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.63■□□□□ 0.57
AP3B1O00203 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
AP3B1O00203 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
AP3B1O00203 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3B1O00203 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
AP3B1O00203 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 AC128688.1-201ENST00000487626 519 ntBASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms