Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC188H7C350 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC188H7C350 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC188H7C350 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC188H7C350 AC091390.4-202ENST00000476426 537 ntBASIC19.21■□□□□ 0.67
CCDC188H7C350 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC188H7C350 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
CCDC188H7C350 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC188H7C350 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC188H7C350 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC188H7C350 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC188H7C350 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC188H7C350 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC188H7C350 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC188H7C350 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 KRT17P3-201ENST00000420566 1262 ntBASIC19.2■□□□□ 0.66
CCDC188H7C350 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC188H7C350 AC069544.1-201ENST00000609399 999 ntBASIC19.2■□□□□ 0.66
CCDC188H7C350 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC188H7C350 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC188H7C350 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC188H7C350 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.2■□□□□ 0.66
CCDC188H7C350 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC188H7C350 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC188H7C350 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC188H7C350 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC188H7C350 AL645608.8-201ENST00000606034 2086 ntBASIC19.2■□□□□ 0.66
CCDC188H7C350 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC188H7C350 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC188H7C350 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC188H7C350 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC188H7C350 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC188H7C350 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC188H7C350 NIFKP9-201ENST00000419265 221 ntBASIC19.19■□□□□ 0.66
CCDC188H7C350 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.19■□□□□ 0.66
CCDC188H7C350 CKBP1-201ENST00000565489 1086 ntBASIC19.19■□□□□ 0.66
CCDC188H7C350 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.19■□□□□ 0.66
CCDC188H7C350 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC188H7C350 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC188H7C350 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC188H7C350 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC19.19■□□□□ 0.66
CCDC188H7C350 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC188H7C350 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC188H7C350 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC188H7C350 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC188H7C350 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC188H7C350 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC188H7C350 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC188H7C350 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.18■□□□□ 0.66
CCDC188H7C350 AC004951.3-201ENST00000418645 1148 ntBASIC19.18■□□□□ 0.66
CCDC188H7C350 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC188H7C350 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC188H7C350 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC188H7C350 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC188H7C350 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC188H7C350 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
CCDC188H7C350 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC188H7C350 PHGDH-209ENST00000641074 1780 ntBASIC19.18■□□□□ 0.66
CCDC188H7C350 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC188H7C350 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC188H7C350 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
CCDC188H7C350 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms