Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.19■□□□□ 0.18
MBD3L5A6NJ08 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L5A6NJ08 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
MBD3L5A6NJ08 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC16.19■□□□□ 0.18
MBD3L5A6NJ08 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
MBD3L5A6NJ08 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 AC099336.1-202ENST00000602961 463 ntBASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
MBD3L5A6NJ08 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 AL845331.1-201ENST00000424978 1190 ntBASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 AP005901.3-202ENST00000581653 237 ntBASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 AC138894.3-201ENST00000603787 634 ntBASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 NSUN5P1-202ENST00000421140 1535 ntBASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 NSUN5P2-203ENST00000457352 1529 ntBASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 AL499627.1-201ENST00000569373 2188 ntBASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
MBD3L5A6NJ08 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
MBD3L5A6NJ08 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
MBD3L5A6NJ08 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms