Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 AL645608.8-201ENST00000606034 2086 ntBASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CAPN6Q9Y6Q1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CAPN6Q9Y6Q1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 AL353708.3-201ENST00000610272 989 ntBASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 AC110285.5-201ENST00000611501 352 ntBASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 AC008622.2-201ENST00000617006 1229 ntBASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 AC011298.2-201ENST00000617989 482 ntBASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CAPN6Q9Y6Q1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 PHGDH-209ENST00000641074 1780 ntBASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 AC012317.2-201ENST00000623305 2251 ntBASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 PP12613-201ENST00000424958 2230 ntBASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CAPN6Q9Y6Q1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 KSR1P1-201ENST00000446298 240 ntBASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 AP002982.1-201ENST00000492365 877 ntBASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.56■□□□□ 0.72
CAPN6Q9Y6Q1 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms