Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 MARS-234ENST00000630571 216 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 MARS-235ENST00000630803 183 ntTSL 3 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PCDHGB1Q9Y5G3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 MIR4758-201ENST00000577688 71 ntBASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 MYC-208ENST00000641036 567 ntBASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
PCDHGB1Q9Y5G3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 PRORSD1P-201ENST00000295112 541 ntBASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 OR2A1-AS1-201ENST00000462305 773 ntBASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC16.91■□□□□ 0.3
PCDHGB1Q9Y5G3 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms