Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.48■□□□□ 0.39
AP4S1Q9Y587 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 AC007322.1-201ENST00000426983 750 ntBASIC17.47■□□□□ 0.39
AP4S1Q9Y587 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4S1Q9Y587 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4S1Q9Y587 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
AP4S1Q9Y587 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.38
AP4S1Q9Y587 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.46■□□□□ 0.38
AP4S1Q9Y587 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 KRT8P32-201ENST00000512863 1461 ntBASIC17.45■□□□□ 0.38
AP4S1Q9Y587 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 AL357033.4-201ENST00000617703 1807 ntBASIC17.45■□□□□ 0.38
AP4S1Q9Y587 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 AL160286.2-201ENST00000567150 934 ntBASIC17.45■□□□□ 0.38
AP4S1Q9Y587 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
AP4S1Q9Y587 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms