Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 AC009053.2-201ENST00000563701 2365 ntBASIC17.32■□□□□ 0.36
IFT52Q9Y366 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 AC008040.2-201ENST00000461049 708 ntBASIC17.32■□□□□ 0.36
IFT52Q9Y366 AC011506.1-201ENST00000474329 610 ntBASIC17.32■□□□□ 0.36
IFT52Q9Y366 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 AP000692.2-201ENST00000608391 879 ntBASIC17.32■□□□□ 0.36
IFT52Q9Y366 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.32■□□□□ 0.36
IFT52Q9Y366 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
IFT52Q9Y366 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.31■□□□□ 0.36
IFT52Q9Y366 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 AC067852.2-201ENST00000590513 2313 ntBASIC17.31■□□□□ 0.36
IFT52Q9Y366 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.31■□□□□ 0.36
IFT52Q9Y366 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
IFT52Q9Y366 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 AC126763.1-201ENST00000552015 2118 ntBASIC17.3■□□□□ 0.36
IFT52Q9Y366 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.3■□□□□ 0.36
IFT52Q9Y366 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
IFT52Q9Y366 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT52Q9Y366 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
IFT52Q9Y366 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.29■□□□□ 0.36
IFT52Q9Y366 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.29■□□□□ 0.36
IFT52Q9Y366 AL357033.4-201ENST00000617703 1807 ntBASIC17.29■□□□□ 0.36
IFT52Q9Y366 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
IFT52Q9Y366 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.29■□□□□ 0.36
IFT52Q9Y366 FAM197Y1-201ENST00000421178 764 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms