Protein–RNA interactions for Protein: Q9UFN0

NIPSNAP3A, Protein NipSnap homolog 3A, humanhuman

Predicted RBP Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3AQ9UFN0 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC239809.2-201ENST00000415381 517 ntBASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 PRSS44-201ENST00000515154 1146 ntBASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 AP003097.1-201ENST00000530657 1135 ntBASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 AL023875.1-201ENST00000640777 796 ntBASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NIPSNAP3AQ9UFN0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 KRT8P3-201ENST00000519669 1449 ntBASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC131212.4-201ENST00000623606 975 ntBASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.67■□□□□ 0.42
NIPSNAP3AQ9UFN0 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 KRT16P5-201ENST00000455284 522 ntBASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC233263.1-201ENST00000578059 224 ntBASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NIPSNAP3AQ9UFN0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 KRT8P45-201ENST00000414328 1447 ntBASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 RNA5SP413-201ENST00000516373 109 ntBASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 AL445675.2-201ENST00000620291 557 ntBASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NIPSNAP3AQ9UFN0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms