Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 OR2I1P-210ENST00000642037 4691 ntBASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 AL359258.2-201ENST00000564063 1566 ntBASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CDC42SE1Q9NRR8 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 AC138035.3-201ENST00000622706 2791 ntBASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 AC005224.4-201ENST00000583262 1652 ntBASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC9.47□□□□□ -0.89
CDC42SE1Q9NRR8 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
CDC42SE1Q9NRR8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms