Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS11Q9H270 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
VPS11Q9H270 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS11Q9H270 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS11Q9H270 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 PRSS44-201ENST00000515154 1146 ntBASIC18.61■□□□□ 0.57
VPS11Q9H270 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.61■□□□□ 0.57
VPS11Q9H270 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 AC124016.1-201ENST00000609552 612 ntBASIC18.61■□□□□ 0.57
VPS11Q9H270 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS11Q9H270 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.61■□□□□ 0.57
VPS11Q9H270 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
VPS11Q9H270 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.61■□□□□ 0.57
VPS11Q9H270 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 AC093677.2-201ENST00000600169 1863 ntBASIC18.6■□□□□ 0.57
VPS11Q9H270 AC138028.4-201ENST00000564984 1845 ntBASIC18.6■□□□□ 0.57
VPS11Q9H270 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS11Q9H270 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS11Q9H270 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.6■□□□□ 0.57
VPS11Q9H270 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
VPS11Q9H270 KRT8P3-201ENST00000519669 1449 ntBASIC18.6■□□□□ 0.57
VPS11Q9H270 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS11Q9H270 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
VPS11Q9H270 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
VPS11Q9H270 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.6■□□□□ 0.57
VPS11Q9H270 AC004980.1-204ENST00000429707 299 ntBASIC18.6■□□□□ 0.57
VPS11Q9H270 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.6■□□□□ 0.57
VPS11Q9H270 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.6■□□□□ 0.57
VPS11Q9H270 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
VPS11Q9H270 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
VPS11Q9H270 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
VPS11Q9H270 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 AC139713.2-201ENST00000641328 2723 ntBASIC18.59■□□□□ 0.57
VPS11Q9H270 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.59■□□□□ 0.57
VPS11Q9H270 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 AL357033.4-201ENST00000617703 1807 ntBASIC18.59■□□□□ 0.57
VPS11Q9H270 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.59■□□□□ 0.57
VPS11Q9H270 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.59■□□□□ 0.57
VPS11Q9H270 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.59■□□□□ 0.57
VPS11Q9H270 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC18.59■□□□□ 0.57
VPS11Q9H270 AC110285.5-201ENST00000611501 352 ntBASIC18.59■□□□□ 0.57
VPS11Q9H270 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VPS11Q9H270 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VPS11Q9H270 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.59■□□□□ 0.57
VPS11Q9H270 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VPS11Q9H270 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
VPS11Q9H270 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.58■□□□□ 0.57
VPS11Q9H270 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VPS11Q9H270 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms