Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 AC008764.6-201ENST00000595909 2069 ntBASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 RCC2P3-201ENST00000418112 1537 ntBASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
POLR2J3Q9H1A7 AL109659.2-201ENST00000606809 1674 ntBASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 MIR6786-201ENST00000616843 113 ntBASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 AL135905.2-201ENST00000584934 1404 ntBASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 FSCN1P1-201ENST00000568912 1481 ntBASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
POLR2J3Q9H1A7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 AP000593.1-201ENST00000393668 712 ntBASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 B3GAT3P1-201ENST00000471720 806 ntBASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 RPPH1-201ENST00000516869 333 ntBASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.09■□□□□ 0.33
POLR2J3Q9H1A7 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 AC135776.1-201ENST00000319817 2481 ntBASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 PKD1P1-201ENST00000458669 6805 ntBASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
POLR2J3Q9H1A7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.08■□□□□ 0.32
POLR2J3Q9H1A7 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms