Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 EDA-201ENST00000338901 1233 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AC091305.1-201ENST00000479476 895 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AL162412.1-201ENST00000567129 965 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 MAG-206ENST00000597035 542 ntTSL 4 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AC100791.3-201ENST00000617619 330 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AC141586.5-201ENST00000624546 2050 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AC084018.2-201ENST00000613093 2607 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PCDHA12-202ENST00000613593 2588 ntBASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LCE3DQ9BYE3 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LCE3DQ9BYE3 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms