Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 ESPNP-201ENST00000270691 2015 ntBASIC21.87■■□□□ 1.09
NEK1Q96PY6 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC21.87■■□□□ 1.09
NEK1Q96PY6 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
NEK1Q96PY6 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 RPS20-210ENST00000523936 899 ntTSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 ABALON-201ENST00000629058 1903 ntBASIC21.86■■□□□ 1.09
NEK1Q96PY6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
NEK1Q96PY6 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
NEK1Q96PY6 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 SDHAP2-201ENST00000455183 2001 ntBASIC21.85■■□□□ 1.09
NEK1Q96PY6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 AC010331.1-201ENST00000611423 582 ntBASIC21.85■■□□□ 1.09
NEK1Q96PY6 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
NEK1Q96PY6 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC21.85■■□□□ 1.09
NEK1Q96PY6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 AC093677.2-201ENST00000600169 1863 ntBASIC21.84■■□□□ 1.09
NEK1Q96PY6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.84■■□□□ 1.09
NEK1Q96PY6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 MIR149-201ENST00000384879 89 ntBASIC21.84■■□□□ 1.09
NEK1Q96PY6 GRAMD4P1-201ENST00000435181 1110 ntBASIC21.84■■□□□ 1.09
NEK1Q96PY6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
NEK1Q96PY6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
NEK1Q96PY6 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms