Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC23.74■■□□□ 1.39
ZNF428Q96B54 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
ZNF428Q96B54 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 MIR3917-201ENST00000580971 93 ntBASIC23.73■■□□□ 1.39
ZNF428Q96B54 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 AC009102.3-201ENST00000623118 1491 ntBASIC23.73■■□□□ 1.39
ZNF428Q96B54 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
ZNF428Q96B54 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
ZNF428Q96B54 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 ZNF444P1-201ENST00000559497 298 ntBASIC23.72■■□□□ 1.39
ZNF428Q96B54 AC116407.4-201ENST00000623319 1061 ntBASIC23.72■■□□□ 1.39
ZNF428Q96B54 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC23.72■■□□□ 1.39
ZNF428Q96B54 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
ZNF428Q96B54 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC23.71■■□□□ 1.39
ZNF428Q96B54 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
ZNF428Q96B54 SDHAP2-201ENST00000455183 2001 ntBASIC23.71■■□□□ 1.39
ZNF428Q96B54 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZNF428Q96B54 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZNF428Q96B54 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
ZNF428Q96B54 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC23.7■■□□□ 1.39
ZNF428Q96B54 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.39
ZNF428Q96B54 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
ZNF428Q96B54 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF428Q96B54 STARP1-201ENST00000397973 869 ntBASIC23.7■■□□□ 1.38
ZNF428Q96B54 RASA4DP-201ENST00000460726 1199 ntBASIC23.7■■□□□ 1.38
ZNF428Q96B54 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF428Q96B54 DBP-204ENST00000599385 709 ntTSL 3 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF428Q96B54 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF428Q96B54 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF428Q96B54 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
ZNF428Q96B54 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
ZNF428Q96B54 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
ZNF428Q96B54 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
ZNF428Q96B54 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms