Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 RCC2P6-201ENST00000526625 1557 ntBASIC16.29■□□□□ 0.2
AP3S1Q92572 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
AP3S1Q92572 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.29■□□□□ 0.2
AP3S1Q92572 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
AP3S1Q92572 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
AP3S1Q92572 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.28■□□□□ 0.2
AP3S1Q92572 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
AP3S1Q92572 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
AP3S1Q92572 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.28■□□□□ 0.2
AP3S1Q92572 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.28■□□□□ 0.2
AP3S1Q92572 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.28■□□□□ 0.2
AP3S1Q92572 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.28■□□□□ 0.2
AP3S1Q92572 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.28■□□□□ 0.2
AP3S1Q92572 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC16.28■□□□□ 0.2
AP3S1Q92572 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC16.28■□□□□ 0.2
AP3S1Q92572 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
AP3S1Q92572 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
AP3S1Q92572 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
AP3S1Q92572 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
AP3S1Q92572 KRT8P45-201ENST00000414328 1447 ntBASIC16.28■□□□□ 0.2
AP3S1Q92572 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 AC008406.3-201ENST00000620001 1374 ntBASIC16.27■□□□□ 0.2
AP3S1Q92572 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.27■□□□□ 0.2
AP3S1Q92572 AL121761.2-201ENST00000598007 1648 ntBASIC16.27■□□□□ 0.2
AP3S1Q92572 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3S1Q92572 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3S1Q92572 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3S1Q92572 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
AP3S1Q92572 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
AP3S1Q92572 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3S1Q92572 STOX2-205ENST00000513034 807 ntTSL 3 BASIC16.27■□□□□ 0.2
AP3S1Q92572 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3S1Q92572 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
AP3S1Q92572 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.27■□□□□ 0.2
AP3S1Q92572 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.27■□□□□ 0.2
AP3S1Q92572 AC008556.1-201ENST00000610908 2040 ntBASIC16.27■□□□□ 0.2
AP3S1Q92572 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.27■□□□□ 0.19
AP3S1Q92572 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
AP3S1Q92572 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S1Q92572 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S1Q92572 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.27■□□□□ 0.19
AP3S1Q92572 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S1Q92572 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
AP3S1Q92572 NKILA-202ENST00000614771 2598 ntBASIC16.27■□□□□ 0.19
AP3S1Q92572 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
AP3S1Q92572 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
AP3S1Q92572 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
AP3S1Q92572 KRT18P11-201ENST00000435214 1283 ntBASIC16.26■□□□□ 0.19
AP3S1Q92572 TUBB8P6-201ENST00000436895 1288 ntBASIC16.26■□□□□ 0.19
AP3S1Q92572 AC110285.6-201ENST00000617652 491 ntBASIC16.26■□□□□ 0.19
AP3S1Q92572 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms