Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 GCSHP5-201ENST00000443090 522 ntBASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 AL158047.1-201ENST00000445918 881 ntBASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 AL445675.2-201ENST00000620291 557 ntBASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RTN4IP1Q8WWV3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 ESPNP-201ENST00000270691 2015 ntBASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 KSR1P1-201ENST00000446298 240 ntBASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
RTN4IP1Q8WWV3 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 UBE2SP1-201ENST00000450587 669 ntBASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 AF186192.3-201ENST00000583427 947 ntBASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC15.56■□□□□ 0.08
RTN4IP1Q8WWV3 AC131212.4-201ENST00000623606 975 ntBASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms