Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 NEFHP1-201ENST00000412845 2629 ntBASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 AC004408.2-201ENST00000623613 2777 ntBASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C11orf42Q8N5U0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 TERF1P1-201ENST00000311003 1181 ntBASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 MCCD1P1-208ENST00000445732 328 ntBASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
C11orf42Q8N5U0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 AC005521.1-201ENST00000393351 872 ntBASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC15.37■□□□□ 0.05
C11orf42Q8N5U0 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 RCN1P1-201ENST00000400413 996 ntBASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 MIR3180-5-201ENST00000583743 153 ntBASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC15.36■□□□□ 0.05
C11orf42Q8N5U0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms