Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 MIR662-201ENST00000384847 95 ntBASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 AP000593.1-201ENST00000393668 712 ntBASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.47■□□□□ 0.71
SCN4BQ8IWT1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 KRT18P41-201ENST00000518924 1277 ntBASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 AL163051.1-201ENST00000569214 1512 ntBASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SCN4BQ8IWT1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 BX276092.5-203ENST00000456199 560 ntBASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 BCL2-203ENST00000589955 5011 ntBASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.45■□□□□ 0.7
SCN4BQ8IWT1 AL499627.1-201ENST00000569373 2188 ntBASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 HCG4P8-203ENST00000443049 980 ntBASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 KRT18P56-201ENST00000507275 550 ntBASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 RNF126P1-202ENST00000569893 925 ntBASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.44■□□□□ 0.7
SCN4BQ8IWT1 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms