Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AL023803.3-201ENST00000615559 522 ntBASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 AP006294.2-201ENST00000641667 209 ntBASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CDKL3Q8IVW4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
CDKL3Q8IVW4 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
CDKL3Q8IVW4 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 FITM1-202ENST00000559294 800 ntBASIC19■□□□□ 0.63
CDKL3Q8IVW4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19■□□□□ 0.63
CDKL3Q8IVW4 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19■□□□□ 0.63
CDKL3Q8IVW4 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19■□□□□ 0.63
CDKL3Q8IVW4 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19■□□□□ 0.63
CDKL3Q8IVW4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19■□□□□ 0.63
CDKL3Q8IVW4 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 AC135776.1-201ENST00000319817 2481 ntBASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 CCR12P-201ENST00000446203 998 ntBASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 AP003041.3-201ENST00000527151 707 ntBASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 AL353719.1-201ENST00000566847 864 ntBASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CDKL3Q8IVW4 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 SNORA78-201ENST00000459373 127 ntBASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 HTR7P1-202ENST00000624664 4411 ntBASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CDKL3Q8IVW4 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 AC093677.2-201ENST00000600169 1863 ntBASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 MIR1238-201ENST00000408483 83 ntBASIC18.97■□□□□ 0.63
CDKL3Q8IVW4 AL390955.1-201ENST00000428694 934 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms