Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.68■□□□□ 0.58
CDH17Q12864 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 AC010653.2-201ENST00000623505 997 ntBASIC18.68■□□□□ 0.58
CDH17Q12864 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.68■□□□□ 0.58
CDH17Q12864 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.68■□□□□ 0.58
CDH17Q12864 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CDH17Q12864 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH17Q12864 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.67■□□□□ 0.58
CDH17Q12864 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.67■□□□□ 0.58
CDH17Q12864 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.67■□□□□ 0.58
CDH17Q12864 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 NOC2LP1-202ENST00000452600 2235 ntBASIC18.67■□□□□ 0.58
CDH17Q12864 CYP51A1P1-201ENST00000492267 1507 ntBASIC18.67■□□□□ 0.58
CDH17Q12864 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CDH17Q12864 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDH17Q12864 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH17Q12864 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH17Q12864 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH17Q12864 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
CDH17Q12864 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.66■□□□□ 0.58
CDH17Q12864 KRT18P23-201ENST00000435622 1283 ntBASIC18.66■□□□□ 0.58
CDH17Q12864 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.66■□□□□ 0.58
CDH17Q12864 EGLN1P1-201ENST00000531623 762 ntBASIC18.66■□□□□ 0.58
CDH17Q12864 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.66■□□□□ 0.58
CDH17Q12864 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDH17Q12864 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH17Q12864 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH17Q12864 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.66■□□□□ 0.58
CDH17Q12864 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH17Q12864 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDH17Q12864 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDH17Q12864 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CDH17Q12864 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH17Q12864 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH17Q12864 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 AC093677.2-201ENST00000600169 1863 ntBASIC18.65■□□□□ 0.58
CDH17Q12864 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
CDH17Q12864 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.65■□□□□ 0.58
CDH17Q12864 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDH17Q12864 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 AC128688.1-201ENST00000487626 519 ntBASIC18.65■□□□□ 0.58
CDH17Q12864 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.65■□□□□ 0.58
CDH17Q12864 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CDH17Q12864 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH17Q12864 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH17Q12864 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH17Q12864 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDH17Q12864 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDH17Q12864 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms