Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 ANO7L1-203ENST00000602586 1720 ntBASIC14.16□□□□□ -0.14
HIST1H1AQ02539 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 CD99P1-205ENST00000527459 561 ntBASIC14.16□□□□□ -0.14
HIST1H1AQ02539 ADM-205ENST00000528544 586 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 AC131212.4-201ENST00000623606 975 ntBASIC14.16□□□□□ -0.14
HIST1H1AQ02539 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC14.16□□□□□ -0.14
HIST1H1AQ02539 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 AC011270.2-201ENST00000624293 2550 ntBASIC14.15□□□□□ -0.14
HIST1H1AQ02539 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 AC128676.1-201ENST00000454392 318 ntBASIC14.15□□□□□ -0.14
HIST1H1AQ02539 AC133681.1-201ENST00000465482 601 ntBASIC14.15□□□□□ -0.14
HIST1H1AQ02539 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 C1QBPP2-201ENST00000528754 825 ntBASIC14.15□□□□□ -0.14
HIST1H1AQ02539 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 KRT8P41-201ENST00000533985 1514 ntBASIC14.15□□□□□ -0.14
HIST1H1AQ02539 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 AC009053.2-201ENST00000563701 2365 ntBASIC14.15□□□□□ -0.14
HIST1H1AQ02539 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
HIST1H1AQ02539 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
HIST1H1AQ02539 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
HIST1H1AQ02539 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.14□□□□□ -0.15
HIST1H1AQ02539 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms