Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.42■□□□□ 0.7
USP46P62068 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.42■□□□□ 0.7
USP46P62068 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
USP46P62068 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.42■□□□□ 0.7
USP46P62068 AC069148.1-201ENST00000608741 768 ntBASIC19.42■□□□□ 0.7
USP46P62068 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.42■□□□□ 0.7
USP46P62068 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.42■□□□□ 0.7
USP46P62068 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
USP46P62068 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP46P62068 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.41■□□□□ 0.7
USP46P62068 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.41■□□□□ 0.7
USP46P62068 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP46P62068 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP46P62068 MIR662-201ENST00000384847 95 ntBASIC19.41■□□□□ 0.7
USP46P62068 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.41■□□□□ 0.7
USP46P62068 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP46P62068 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
USP46P62068 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.41■□□□□ 0.7
USP46P62068 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
USP46P62068 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
USP46P62068 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 AL499627.1-201ENST00000569373 2188 ntBASIC19.4■□□□□ 0.7
USP46P62068 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP46P62068 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.4■□□□□ 0.7
USP46P62068 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.4■□□□□ 0.7
USP46P62068 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 KRT18P41-201ENST00000518924 1277 ntBASIC19.4■□□□□ 0.7
USP46P62068 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.4■□□□□ 0.7
USP46P62068 AC011498.5-201ENST00000592027 486 ntBASIC19.4■□□□□ 0.7
USP46P62068 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.4■□□□□ 0.7
USP46P62068 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
USP46P62068 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
USP46P62068 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.4■□□□□ 0.7
USP46P62068 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
USP46P62068 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP46P62068 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.39■□□□□ 0.7
USP46P62068 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
USP46P62068 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
USP46P62068 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
USP46P62068 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
USP46P62068 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
USP46P62068 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 PVRIG2P-201ENST00000435460 978 ntBASIC19.39■□□□□ 0.69
USP46P62068 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
USP46P62068 RNF126P1-202ENST00000569893 925 ntBASIC19.39■□□□□ 0.69
USP46P62068 MIR3180-4-201ENST00000582223 153 ntBASIC19.39■□□□□ 0.69
USP46P62068 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC19.39■□□□□ 0.69
USP46P62068 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP46P62068 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
USP46P62068 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
USP46P62068 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
USP46P62068 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.38■□□□□ 0.69
USP46P62068 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.38■□□□□ 0.69
USP46P62068 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
USP46P62068 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP46P62068 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.38■□□□□ 0.69
USP46P62068 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP46P62068 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
USP46P62068 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP46P62068 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.38■□□□□ 0.69
USP46P62068 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
USP46P62068 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
USP46P62068 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
USP46P62068 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
USP46P62068 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
USP46P62068 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.38■□□□□ 0.69
USP46P62068 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
USP46P62068 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.37■□□□□ 0.69
USP46P62068 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
USP46P62068 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms