Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.94■□□□□ 0.3
CLDN20P56880 AL138966.2-201ENST00000621997 464 ntBASIC16.94■□□□□ 0.3
CLDN20P56880 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 AL512353.2-201ENST00000448759 1962 ntBASIC16.94■□□□□ 0.3
CLDN20P56880 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC16.94■□□□□ 0.3
CLDN20P56880 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CLDN20P56880 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN20P56880 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CLDN20P56880 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLDN20P56880 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CLDN20P56880 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC16.93■□□□□ 0.3
CLDN20P56880 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.93■□□□□ 0.3
CLDN20P56880 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN20P56880 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CLDN20P56880 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CLDN20P56880 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN20P56880 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN20P56880 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN20P56880 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
CLDN20P56880 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN20P56880 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN20P56880 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CLDN20P56880 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN20P56880 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN20P56880 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN20P56880 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN20P56880 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN20P56880 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN20P56880 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN20P56880 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN20P56880 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLDN20P56880 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
CLDN20P56880 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN20P56880 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN20P56880 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 WIZP1-201ENST00000531444 2299 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CLDN20P56880 RCC2P3-201ENST00000418112 1537 ntBASIC16.91■□□□□ 0.3
CLDN20P56880 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN20P56880 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN20P56880 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN20P56880 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CLDN20P56880 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN20P56880 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
CLDN20P56880 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms