Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.65■□□□□ 0.58
LIMK2P53671 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK2P53671 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LIMK2P53671 ATP5G1P1-201ENST00000448724 379 ntBASIC18.65■□□□□ 0.58
LIMK2P53671 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
LIMK2P53671 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LIMK2P53671 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.65■□□□□ 0.58
LIMK2P53671 AC005332.8-201ENST00000622750 2735 ntBASIC18.65■□□□□ 0.58
LIMK2P53671 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LIMK2P53671 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
LIMK2P53671 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
LIMK2P53671 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
LIMK2P53671 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.64■□□□□ 0.57
LIMK2P53671 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.64■□□□□ 0.57
LIMK2P53671 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.64■□□□□ 0.57
LIMK2P53671 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 MFAP1P1-201ENST00000442257 1255 ntBASIC18.64■□□□□ 0.57
LIMK2P53671 AC104076.2-201ENST00000448912 469 ntBASIC18.64■□□□□ 0.57
LIMK2P53671 DUX4L26-201ENST00000489078 1255 ntBASIC18.64■□□□□ 0.57
LIMK2P53671 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC18.64■□□□□ 0.57
LIMK2P53671 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.64■□□□□ 0.57
LIMK2P53671 CKBP1-201ENST00000565489 1086 ntBASIC18.64■□□□□ 0.57
LIMK2P53671 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.64■□□□□ 0.57
LIMK2P53671 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.64■□□□□ 0.57
LIMK2P53671 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
LIMK2P53671 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LIMK2P53671 RCC2P3-201ENST00000418112 1537 ntBASIC18.64■□□□□ 0.57
LIMK2P53671 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
LIMK2P53671 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.63■□□□□ 0.57
LIMK2P53671 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 INGX-201ENST00000359239 846 ntBASIC18.63■□□□□ 0.57
LIMK2P53671 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 AC068880.1-201ENST00000507289 2297 ntBASIC18.63■□□□□ 0.57
LIMK2P53671 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
LIMK2P53671 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
LIMK2P53671 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
LIMK2P53671 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.62■□□□□ 0.57
LIMK2P53671 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.62■□□□□ 0.57
LIMK2P53671 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.62■□□□□ 0.57
LIMK2P53671 FAM87A-204ENST00000613235 858 ntBASIC18.62■□□□□ 0.57
LIMK2P53671 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.62■□□□□ 0.57
LIMK2P53671 AC116562.4-202ENST00000641738 218 ntBASIC18.62■□□□□ 0.57
LIMK2P53671 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.62■□□□□ 0.57
LIMK2P53671 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
LIMK2P53671 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms