Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 FAM86EP-206ENST00000510506 987 ntBASIC20.85■□□□□ 0.93
USP11P51784 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.85■□□□□ 0.93
USP11P51784 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.85■□□□□ 0.93
USP11P51784 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.85■□□□□ 0.93
USP11P51784 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
USP11P51784 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.85■□□□□ 0.93
USP11P51784 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
USP11P51784 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.85■□□□□ 0.93
USP11P51784 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
USP11P51784 AC005082.1-201ENST00000413042 2259 ntBASIC20.85■□□□□ 0.93
USP11P51784 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.85■□□□□ 0.93
USP11P51784 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
USP11P51784 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
USP11P51784 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
USP11P51784 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
USP11P51784 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.84■□□□□ 0.93
USP11P51784 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.84■□□□□ 0.93
USP11P51784 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.84■□□□□ 0.93
USP11P51784 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
USP11P51784 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.84■□□□□ 0.93
USP11P51784 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.83■□□□□ 0.93
USP11P51784 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP11P51784 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP11P51784 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP11P51784 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP11P51784 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
USP11P51784 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
USP11P51784 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
USP11P51784 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC20.83■□□□□ 0.93
USP11P51784 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.83■□□□□ 0.93
USP11P51784 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
USP11P51784 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC20.83■□□□□ 0.92
USP11P51784 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
USP11P51784 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
USP11P51784 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
USP11P51784 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.82■□□□□ 0.92
USP11P51784 KRT89P-201ENST00000620027 1478 ntBASIC20.82■□□□□ 0.92
USP11P51784 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.82■□□□□ 0.92
USP11P51784 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.82■□□□□ 0.92
USP11P51784 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
USP11P51784 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC20.82■□□□□ 0.92
USP11P51784 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms