Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6CP51160 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDE6CP51160 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDE6CP51160 AC073592.3-201ENST00000625118 1834 ntBASIC19.97■□□□□ 0.79
PDE6CP51160 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6CP51160 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6CP51160 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6CP51160 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDE6CP51160 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PDE6CP51160 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.96■□□□□ 0.79
PDE6CP51160 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.96■□□□□ 0.79
PDE6CP51160 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDE6CP51160 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PDE6CP51160 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.96■□□□□ 0.79
PDE6CP51160 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.96■□□□□ 0.79
PDE6CP51160 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.96■□□□□ 0.79
PDE6CP51160 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 AC007613.1-201ENST00000572811 2597 ntBASIC19.96■□□□□ 0.79
PDE6CP51160 AC008556.1-201ENST00000610908 2040 ntBASIC19.96■□□□□ 0.79
PDE6CP51160 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDE6CP51160 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PDE6CP51160 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.96■□□□□ 0.79
PDE6CP51160 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.95■□□□□ 0.79
PDE6CP51160 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.95■□□□□ 0.78
PDE6CP51160 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.95■□□□□ 0.78
PDE6CP51160 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.95■□□□□ 0.78
PDE6CP51160 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDE6CP51160 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6CP51160 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PDE6CP51160 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6CP51160 MCCD1P1-208ENST00000445732 328 ntBASIC19.95■□□□□ 0.78
PDE6CP51160 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PDE6CP51160 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6CP51160 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.95■□□□□ 0.78
PDE6CP51160 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.95■□□□□ 0.78
PDE6CP51160 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.95■□□□□ 0.78
PDE6CP51160 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDE6CP51160 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.95■□□□□ 0.78
PDE6CP51160 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
PDE6CP51160 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PDE6CP51160 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 KRT8P45-201ENST00000414328 1447 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 AC112777.1-201ENST00000540175 1423 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PDE6CP51160 GPAT2P1-201ENST00000444924 1672 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PDE6CP51160 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6CP51160 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDE6CP51160 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 AL023284.2-201ENST00000405850 579 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6CP51160 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.94■□□□□ 0.78
PDE6CP51160 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.94■□□□□ 0.78
PDE6CP51160 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.94■□□□□ 0.78
PDE6CP51160 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 AC104076.2-201ENST00000448912 469 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.94■□□□□ 0.78
PDE6CP51160 AL138966.2-201ENST00000621997 464 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 AL031432.5-201ENST00000641059 760 ntBASIC19.94■□□□□ 0.78
PDE6CP51160 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDE6CP51160 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PDE6CP51160 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.93■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms