Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF144AP50876 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF144AP50876 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF144AP50876 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.19■□□□□ 0.34
RNF144AP50876 AP003041.3-201ENST00000527151 707 ntBASIC17.19■□□□□ 0.34
RNF144AP50876 AP005242.2-201ENST00000580065 1175 ntBASIC17.19■□□□□ 0.34
RNF144AP50876 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF144AP50876 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.19■□□□□ 0.34
RNF144AP50876 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.19■□□□□ 0.34
RNF144AP50876 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RNF144AP50876 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RNF144AP50876 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RNF144AP50876 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
RNF144AP50876 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RNF144AP50876 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
RNF144AP50876 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF144AP50876 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF144AP50876 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF144AP50876 MCCD1P1-208ENST00000445732 328 ntBASIC17.18■□□□□ 0.34
RNF144AP50876 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.18■□□□□ 0.34
RNF144AP50876 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.18■□□□□ 0.34
RNF144AP50876 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RNF144AP50876 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.18■□□□□ 0.34
RNF144AP50876 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RNF144AP50876 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF144AP50876 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF144AP50876 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RNF144AP50876 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RNF144AP50876 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
RNF144AP50876 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF144AP50876 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF144AP50876 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF144AP50876 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF144AP50876 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF144AP50876 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF144AP50876 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF144AP50876 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF144AP50876 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF144AP50876 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF144AP50876 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF144AP50876 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF144AP50876 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF144AP50876 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF144AP50876 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms