Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 NFYC-AS1-201ENST00000606277 1687 ntBASIC19.66■□□□□ 0.74
SSR1P43307 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SSR1P43307 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.66■□□□□ 0.74
SSR1P43307 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 GCSHP5-201ENST00000443090 522 ntBASIC19.66■□□□□ 0.74
SSR1P43307 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SSR1P43307 SLC25A1P4-201ENST00000567977 778 ntBASIC19.66■□□□□ 0.74
SSR1P43307 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.66■□□□□ 0.74
SSR1P43307 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.66■□□□□ 0.74
SSR1P43307 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.66■□□□□ 0.74
SSR1P43307 KRT8P32-201ENST00000512863 1461 ntBASIC19.66■□□□□ 0.74
SSR1P43307 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SSR1P43307 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SSR1P43307 MTMR9LP-203ENST00000426597 1545 ntBASIC19.66■□□□□ 0.74
SSR1P43307 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR1P43307 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR1P43307 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.65■□□□□ 0.74
SSR1P43307 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 RCC2P3-201ENST00000418112 1537 ntBASIC19.65■□□□□ 0.74
SSR1P43307 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SSR1P43307 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR1P43307 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SSR1P43307 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.65■□□□□ 0.74
SSR1P43307 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SSR1P43307 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSR1P43307 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SSR1P43307 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SSR1P43307 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SSR1P43307 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SSR1P43307 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SSR1P43307 RPS2P55-201ENST00000397318 883 ntBASIC19.64■□□□□ 0.73
SSR1P43307 AC107956.1-201ENST00000494359 873 ntBASIC19.64■□□□□ 0.73
SSR1P43307 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
SSR1P43307 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.64■□□□□ 0.73
SSR1P43307 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR1P43307 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR1P43307 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
SSR1P43307 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SSR1P43307 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SSR1P43307 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR1P43307 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SSR1P43307 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.63■□□□□ 0.73
SSR1P43307 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.63■□□□□ 0.73
SSR1P43307 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.63■□□□□ 0.73
SSR1P43307 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms