Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RORAP35398 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
RORAP35398 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.55■□□□□ 0.4
RORAP35398 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RORAP35398 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
RORAP35398 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
RORAP35398 HEIH-201ENST00000623091 1652 ntBASIC17.55■□□□□ 0.4
RORAP35398 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.55■□□□□ 0.4
RORAP35398 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
RORAP35398 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
RORAP35398 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 AC093525.10-201ENST00000625130 1569 ntBASIC17.54■□□□□ 0.4
RORAP35398 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RORAP35398 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.54■□□□□ 0.4
RORAP35398 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
RORAP35398 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
RORAP35398 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
RORAP35398 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.54■□□□□ 0.4
RORAP35398 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.54■□□□□ 0.4
RORAP35398 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
RORAP35398 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.54■□□□□ 0.4
RORAP35398 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.54■□□□□ 0.4
RORAP35398 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
RORAP35398 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
RORAP35398 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 AC016734.2-201ENST00000624325 1377 ntBASIC17.53■□□□□ 0.4
RORAP35398 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.53■□□□□ 0.4
RORAP35398 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.53■□□□□ 0.4
RORAP35398 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
RORAP35398 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
RORAP35398 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.53■□□□□ 0.4
RORAP35398 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.53■□□□□ 0.4
RORAP35398 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.53■□□□□ 0.4
RORAP35398 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.53■□□□□ 0.4
RORAP35398 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.53■□□□□ 0.4
RORAP35398 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 CLEC4GP1-201ENST00000596555 870 ntBASIC17.53■□□□□ 0.4
RORAP35398 AL121672.3-201ENST00000608644 468 ntBASIC17.53■□□□□ 0.4
RORAP35398 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.53■□□□□ 0.4
RORAP35398 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
RORAP35398 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.53■□□□□ 0.4
RORAP35398 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
RORAP35398 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
RORAP35398 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.52■□□□□ 0.4
RORAP35398 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
RORAP35398 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC17.52■□□□□ 0.4
RORAP35398 PVRIG2P-201ENST00000435460 978 ntBASIC17.52■□□□□ 0.4
RORAP35398 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.52■□□□□ 0.4
RORAP35398 TSSC2-201ENST00000450217 709 ntBASIC17.52■□□□□ 0.4
RORAP35398 BX276092.5-203ENST00000456199 560 ntBASIC17.52■□□□□ 0.4
RORAP35398 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC17.52■□□□□ 0.4
RORAP35398 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.52■□□□□ 0.4
RORAP35398 AC083906.6-201ENST00000641366 219 ntBASIC17.52■□□□□ 0.4
RORAP35398 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.52■□□□□ 0.4
RORAP35398 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
RORAP35398 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms