Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 PBX2P1-201ENST00000493219 1291 ntBASIC14.17□□□□□ -0.14
RAB4AP20338 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC14.17□□□□□ -0.14
RAB4AP20338 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB4AP20338 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB4AP20338 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 PCDH8P1-201ENST00000428983 2773 ntBASIC14.17□□□□□ -0.14
RAB4AP20338 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB4AP20338 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 PHGDH-210ENST00000641115 1638 ntBASIC14.16□□□□□ -0.14
RAB4AP20338 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB4AP20338 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.16□□□□□ -0.14
RAB4AP20338 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
RAB4AP20338 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC14.16□□□□□ -0.14
RAB4AP20338 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 TEX21P-204ENST00000641479 1693 ntBASIC14.16□□□□□ -0.14
RAB4AP20338 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC14.16□□□□□ -0.14
RAB4AP20338 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC14.16□□□□□ -0.14
RAB4AP20338 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
RAB4AP20338 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 GNAS-203ENST00000306120 1878 ntBASIC14.15□□□□□ -0.14
RAB4AP20338 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 CYP21A1P-202ENST00000354927 1481 ntBASIC14.15□□□□□ -0.14
RAB4AP20338 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
RAB4AP20338 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 MIR939-201ENST00000401314 82 ntBASIC14.15□□□□□ -0.14
RAB4AP20338 AC091305.1-201ENST00000479476 895 ntBASIC14.15□□□□□ -0.14
RAB4AP20338 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC14.15□□□□□ -0.14
RAB4AP20338 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
RAB4AP20338 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
RAB4AP20338 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
RAB4AP20338 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms