Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PTPN1P18031 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN1P18031 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
PTPN1P18031 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN1P18031 AC099343.3-201ENST00000605834 2503 ntBASIC19.54■□□□□ 0.72
PTPN1P18031 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PTPN1P18031 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 FXN-203ENST00000396366 922 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN1P18031 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN1P18031 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.54■□□□□ 0.72
PTPN1P18031 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN1P18031 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.54■□□□□ 0.72
PTPN1P18031 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.54■□□□□ 0.72
PTPN1P18031 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
PTPN1P18031 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 IER3-202ENST00000376377 1350 ntBASIC19.54■□□□□ 0.72
PTPN1P18031 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
PTPN1P18031 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.54■□□□□ 0.72
PTPN1P18031 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
PTPN1P18031 AC009102.3-201ENST00000623118 1491 ntBASIC19.54■□□□□ 0.72
PTPN1P18031 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN1P18031 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN1P18031 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN1P18031 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 MIR662-201ENST00000384847 95 ntBASIC19.53■□□□□ 0.72
PTPN1P18031 AL645929.1-201ENST00000420084 975 ntBASIC19.53■□□□□ 0.72
PTPN1P18031 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.53■□□□□ 0.72
PTPN1P18031 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.53■□□□□ 0.72
PTPN1P18031 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
PTPN1P18031 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.53■□□□□ 0.72
PTPN1P18031 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.53■□□□□ 0.72
PTPN1P18031 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
PTPN1P18031 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.53■□□□□ 0.72
PTPN1P18031 TNXA-203ENST00000507684 2038 ntBASIC19.52■□□□□ 0.72
PTPN1P18031 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN1P18031 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.52■□□□□ 0.72
PTPN1P18031 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.52■□□□□ 0.72
PTPN1P18031 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN1P18031 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.52■□□□□ 0.72
PTPN1P18031 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC19.52■□□□□ 0.72
PTPN1P18031 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PTPN1P18031 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN1P18031 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
PTPN1P18031 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
PTPN1P18031 SDHAP2-201ENST00000455183 2001 ntBASIC19.52■□□□□ 0.72
PTPN1P18031 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC19.52■□□□□ 0.72
PTPN1P18031 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
PTPN1P18031 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.52■□□□□ 0.71
PTPN1P18031 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
PTPN1P18031 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN1P18031 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
PTPN1P18031 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN1P18031 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN1P18031 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
PTPN1P18031 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN1P18031 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN1P18031 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN1P18031 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
PTPN1P18031 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN1P18031 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.51■□□□□ 0.71
PTPN1P18031 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.51■□□□□ 0.71
PTPN1P18031 AL162741.1-201ENST00000565563 1558 ntBASIC19.51■□□□□ 0.71
PTPN1P18031 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
PTPN1P18031 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.51■□□□□ 0.71
PTPN1P18031 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN1P18031 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
PTPN1P18031 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms