Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
COL11A1P12107 MYLKP1-201ENST00000509077 1580 ntBASIC20.95■□□□□ 0.94
COL11A1P12107 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
COL11A1P12107 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
COL11A1P12107 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A1P12107 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A1P12107 AC018712.1-201ENST00000455767 687 ntBASIC20.94■□□□□ 0.94
COL11A1P12107 MINOS1P3-201ENST00000457048 203 ntBASIC20.94■□□□□ 0.94
COL11A1P12107 AP001005.1-201ENST00000571755 1248 ntBASIC20.94■□□□□ 0.94
COL11A1P12107 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A1P12107 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.94■□□□□ 0.94
COL11A1P12107 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.94■□□□□ 0.94
COL11A1P12107 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
COL11A1P12107 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
COL11A1P12107 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
COL11A1P12107 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.94■□□□□ 0.94
COL11A1P12107 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.94■□□□□ 0.94
COL11A1P12107 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COL11A1P12107 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.93■□□□□ 0.94
COL11A1P12107 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC20.93■□□□□ 0.94
COL11A1P12107 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.93■□□□□ 0.94
COL11A1P12107 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
COL11A1P12107 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.93■□□□□ 0.94
COL11A1P12107 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.93■□□□□ 0.94
COL11A1P12107 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COL11A1P12107 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL11A1P12107 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.92■□□□□ 0.94
COL11A1P12107 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
COL11A1P12107 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.92■□□□□ 0.94
COL11A1P12107 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.92■□□□□ 0.94
COL11A1P12107 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL11A1P12107 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
COL11A1P12107 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.92■□□□□ 0.94
COL11A1P12107 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.92■□□□□ 0.94
COL11A1P12107 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.92■□□□□ 0.94
COL11A1P12107 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
COL11A1P12107 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.91■□□□□ 0.94
COL11A1P12107 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.91■□□□□ 0.94
COL11A1P12107 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.91■□□□□ 0.94
COL11A1P12107 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.91■□□□□ 0.94
COL11A1P12107 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.91■□□□□ 0.94
COL11A1P12107 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.91■□□□□ 0.94
COL11A1P12107 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC20.91■□□□□ 0.94
COL11A1P12107 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 AC148477.8-201ENST00000624298 468 ntBASIC20.91■□□□□ 0.94
COL11A1P12107 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.91■□□□□ 0.94
COL11A1P12107 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
COL11A1P12107 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
COL11A1P12107 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
COL11A1P12107 LINC01126-201ENST00000623515 1646 ntBASIC20.91■□□□□ 0.94
COL11A1P12107 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
COL11A1P12107 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
COL11A1P12107 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms