Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.55■□□□□ 0.56
APOA4P06727 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.55■□□□□ 0.56
APOA4P06727 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.55■□□□□ 0.56
APOA4P06727 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 AC112777.1-201ENST00000540175 1423 ntBASIC18.55■□□□□ 0.56
APOA4P06727 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
APOA4P06727 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
APOA4P06727 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
APOA4P06727 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
APOA4P06727 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 KRT8P32-201ENST00000512863 1461 ntBASIC18.54■□□□□ 0.56
APOA4P06727 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.54■□□□□ 0.56
APOA4P06727 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 AL390955.1-201ENST00000428694 934 ntBASIC18.54■□□□□ 0.56
APOA4P06727 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 C2orf69P3-201ENST00000565542 1120 ntBASIC18.54■□□□□ 0.56
APOA4P06727 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.54■□□□□ 0.56
APOA4P06727 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
APOA4P06727 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.54■□□□□ 0.56
APOA4P06727 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.54■□□□□ 0.56
APOA4P06727 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 AL133373.2-201ENST00000623187 2828 ntBASIC18.54■□□□□ 0.56
APOA4P06727 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
APOA4P06727 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.53■□□□□ 0.56
APOA4P06727 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.53■□□□□ 0.56
APOA4P06727 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.53■□□□□ 0.56
APOA4P06727 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.53■□□□□ 0.56
APOA4P06727 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.53■□□□□ 0.56
APOA4P06727 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.53■□□□□ 0.56
APOA4P06727 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.53■□□□□ 0.56
APOA4P06727 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
APOA4P06727 AC068880.1-201ENST00000507289 2297 ntBASIC18.53■□□□□ 0.56
APOA4P06727 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APOA4P06727 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.53■□□□□ 0.56
APOA4P06727 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.53■□□□□ 0.56
APOA4P06727 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
APOA4P06727 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APOA4P06727 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.52■□□□□ 0.56
APOA4P06727 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.56
APOA4P06727 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOA4P06727 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOA4P06727 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.52■□□□□ 0.56
APOA4P06727 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.52■□□□□ 0.56
APOA4P06727 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.52■□□□□ 0.56
APOA4P06727 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOA4P06727 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APOA4P06727 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.52■□□□□ 0.56
APOA4P06727 MMP23A-201ENST00000234610 1017 ntBASIC18.52■□□□□ 0.56
APOA4P06727 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.52■□□□□ 0.56
APOA4P06727 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms