Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC22.2■■□□□ 1.14
CHGBP05060 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 LINC01126-201ENST00000623515 1646 ntBASIC22.2■■□□□ 1.14
CHGBP05060 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC22.2■■□□□ 1.14
CHGBP05060 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
CHGBP05060 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC22.19■■□□□ 1.14
CHGBP05060 NEFHP1-201ENST00000412845 2629 ntBASIC22.19■■□□□ 1.14
CHGBP05060 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC22.19■■□□□ 1.14
CHGBP05060 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.19■■□□□ 1.14
CHGBP05060 ZNF444P1-201ENST00000559497 298 ntBASIC22.19■■□□□ 1.14
CHGBP05060 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC22.19■■□□□ 1.14
CHGBP05060 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
CHGBP05060 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.19■■□□□ 1.14
CHGBP05060 AC112777.1-201ENST00000540175 1423 ntBASIC22.19■■□□□ 1.14
CHGBP05060 PBK-203ENST00000522944 1499 ntTSL 2 BASIC22.19■■□□□ 1.14
CHGBP05060 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
CHGBP05060 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CHGBP05060 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC22.18■■□□□ 1.14
CHGBP05060 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC22.18■■□□□ 1.14
CHGBP05060 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC22.18■■□□□ 1.14
CHGBP05060 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.18■■□□□ 1.14
CHGBP05060 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.18■■□□□ 1.14
CHGBP05060 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
CHGBP05060 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC22.18■■□□□ 1.14
CHGBP05060 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22.18■■□□□ 1.14
CHGBP05060 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.18■■□□□ 1.14
CHGBP05060 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
CHGBP05060 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CHGBP05060 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC22.17■■□□□ 1.14
CHGBP05060 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.17■■□□□ 1.14
CHGBP05060 AC034232.1-201ENST00000506026 1064 ntBASIC22.17■■□□□ 1.14
CHGBP05060 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC22.17■■□□□ 1.14
CHGBP05060 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 RNF126P1-202ENST00000569893 925 ntBASIC22.17■■□□□ 1.14
CHGBP05060 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC22.17■■□□□ 1.14
CHGBP05060 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC22.17■■□□□ 1.14
CHGBP05060 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
CHGBP05060 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
CHGBP05060 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CHGBP05060 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CHGBP05060 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CHGBP05060 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC22.16■■□□□ 1.14
CHGBP05060 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CHGBP05060 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC22.16■■□□□ 1.14
CHGBP05060 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.16■■□□□ 1.14
CHGBP05060 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
CHGBP05060 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
CHGBP05060 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms