Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
VAPBO95292 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
VAPBO95292 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.59■□□□□ 0.57
VAPBO95292 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.59■□□□□ 0.57
VAPBO95292 AL023803.3-201ENST00000615559 522 ntBASIC18.59■□□□□ 0.57
VAPBO95292 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.59■□□□□ 0.57
VAPBO95292 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.59■□□□□ 0.57
VAPBO95292 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
VAPBO95292 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.58■□□□□ 0.57
VAPBO95292 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC18.58■□□□□ 0.57
VAPBO95292 AC135776.1-201ENST00000319817 2481 ntBASIC18.58■□□□□ 0.57
VAPBO95292 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
VAPBO95292 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
VAPBO95292 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.58■□□□□ 0.57
VAPBO95292 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAPBO95292 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAPBO95292 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.58■□□□□ 0.56
VAPBO95292 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAPBO95292 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC18.58■□□□□ 0.56
VAPBO95292 SLC25A1P2-201ENST00000430693 912 ntBASIC18.58■□□□□ 0.56
VAPBO95292 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.58■□□□□ 0.56
VAPBO95292 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.58■□□□□ 0.56
VAPBO95292 FITM1-202ENST00000559294 800 ntBASIC18.58■□□□□ 0.56
VAPBO95292 MIR3180-5-201ENST00000583743 153 ntBASIC18.58■□□□□ 0.56
VAPBO95292 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.58■□□□□ 0.56
VAPBO95292 AC034236.2-201ENST00000606662 1610 ntBASIC18.58■□□□□ 0.56
VAPBO95292 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VAPBO95292 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAPBO95292 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VAPBO95292 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
VAPBO95292 AL162741.1-201ENST00000565563 1558 ntBASIC18.58■□□□□ 0.56
VAPBO95292 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
VAPBO95292 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.58■□□□□ 0.56
VAPBO95292 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VAPBO95292 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.58■□□□□ 0.56
VAPBO95292 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.57■□□□□ 0.56
VAPBO95292 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 KRT17P2-201ENST00000300992 1314 ntBASIC18.57■□□□□ 0.56
VAPBO95292 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
VAPBO95292 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC18.57■□□□□ 0.56
VAPBO95292 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 AC036111.1-201ENST00000533973 1582 ntBASIC18.57■□□□□ 0.56
VAPBO95292 AC090340.1-201ENST00000620778 4980 ntBASIC18.57■□□□□ 0.56
VAPBO95292 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
VAPBO95292 MIR1238-201ENST00000408483 83 ntBASIC18.57■□□□□ 0.56
VAPBO95292 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.57■□□□□ 0.56
VAPBO95292 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.57■□□□□ 0.56
VAPBO95292 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.57■□□□□ 0.56
VAPBO95292 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.57■□□□□ 0.56
VAPBO95292 AP003041.3-201ENST00000527151 707 ntBASIC18.57■□□□□ 0.56
VAPBO95292 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VAPBO95292 AL355075.4-201ENST00000554988 638 ntBASIC18.57■□□□□ 0.56
VAPBO95292 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.57■□□□□ 0.56
VAPBO95292 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.57■□□□□ 0.56
VAPBO95292 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VAPBO95292 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.57■□□□□ 0.56
VAPBO95292 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.56■□□□□ 0.56
VAPBO95292 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VAPBO95292 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms