Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH7O60245 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 HTR7P1-202ENST00000624664 4411 ntBASIC17.67■□□□□ 0.42
PCDH7O60245 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PCDH7O60245 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PCDH7O60245 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH7O60245 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH7O60245 AL390955.1-201ENST00000428694 934 ntBASIC17.67■□□□□ 0.42
PCDH7O60245 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH7O60245 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH7O60245 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH7O60245 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH7O60245 FITM1-202ENST00000559294 800 ntBASIC17.67■□□□□ 0.42
PCDH7O60245 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PCDH7O60245 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.67■□□□□ 0.42
PCDH7O60245 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.67■□□□□ 0.42
PCDH7O60245 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
PCDH7O60245 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH7O60245 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.67■□□□□ 0.42
PCDH7O60245 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PCDH7O60245 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PCDH7O60245 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PCDH7O60245 AL133373.2-201ENST00000623187 2828 ntBASIC17.67■□□□□ 0.42
PCDH7O60245 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
PCDH7O60245 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH7O60245 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.66■□□□□ 0.42
PCDH7O60245 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH7O60245 MIR1238-201ENST00000408483 83 ntBASIC17.66■□□□□ 0.42
PCDH7O60245 AP003041.3-201ENST00000527151 707 ntBASIC17.66■□□□□ 0.42
PCDH7O60245 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.66■□□□□ 0.42
PCDH7O60245 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 AL023803.3-201ENST00000615559 522 ntBASIC17.66■□□□□ 0.42
PCDH7O60245 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 AC005332.8-201ENST00000622750 2735 ntBASIC17.66■□□□□ 0.42
PCDH7O60245 KRT17P2-201ENST00000300992 1314 ntBASIC17.66■□□□□ 0.42
PCDH7O60245 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PCDH7O60245 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PCDH7O60245 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH7O60245 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 CCR12P-201ENST00000446203 998 ntBASIC17.65■□□□□ 0.42
PCDH7O60245 TSPY17P-201ENST00000450329 467 ntBASIC17.65■□□□□ 0.42
PCDH7O60245 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC17.65■□□□□ 0.42
PCDH7O60245 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 AL355075.4-201ENST00000554988 638 ntBASIC17.65■□□□□ 0.42
PCDH7O60245 AL353719.1-201ENST00000566847 864 ntBASIC17.65■□□□□ 0.42
PCDH7O60245 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.65■□□□□ 0.42
PCDH7O60245 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PCDH7O60245 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.65■□□□□ 0.42
PCDH7O60245 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
PCDH7O60245 KRT8P50-201ENST00000562022 1438 ntBASIC17.64■□□□□ 0.42
PCDH7O60245 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PCDH7O60245 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms