Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF13O43567 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 AC116562.2-201ENST00000507042 360 ntBASIC16.86■□□□□ 0.29
RNF13O43567 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.86■□□□□ 0.29
RNF13O43567 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 TMEM191A-211ENST00000637163 1067 ntBASIC16.86■□□□□ 0.29
RNF13O43567 AC068587.9-201ENST00000641814 219 ntBASIC16.86■□□□□ 0.29
RNF13O43567 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF13O43567 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.86■□□□□ 0.29
RNF13O43567 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.86■□□□□ 0.29
RNF13O43567 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
RNF13O43567 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF13O43567 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 CYGB-204ENST00000589342 815 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF13O43567 DGCR10-201ENST00000609839 495 ntBASIC16.85■□□□□ 0.29
RNF13O43567 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.85■□□□□ 0.29
RNF13O43567 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
RNF13O43567 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
RNF13O43567 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
RNF13O43567 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
RNF13O43567 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RNF13O43567 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 AC067852.2-201ENST00000590513 2313 ntBASIC16.84■□□□□ 0.29
RNF13O43567 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 MDFI-202ENST00000373050 809 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 MFAP1P1-201ENST00000442257 1255 ntBASIC16.84■□□□□ 0.29
RNF13O43567 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 AC097488.1-201ENST00000507834 756 ntBASIC16.84■□□□□ 0.29
RNF13O43567 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.84■□□□□ 0.29
RNF13O43567 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF13O43567 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.84■□□□□ 0.29
RNF13O43567 Z99916.2-201ENST00000604037 246 ntBASIC16.84■□□□□ 0.29
RNF13O43567 AC026471.5-201ENST00000615068 467 ntBASIC16.84■□□□□ 0.29
RNF13O43567 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF13O43567 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.84■□□□□ 0.29
RNF13O43567 RCC2P3-201ENST00000418112 1537 ntBASIC16.84■□□□□ 0.29
RNF13O43567 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.84■□□□□ 0.29
RNF13O43567 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF13O43567 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF13O43567 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNF13O43567 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
RNF13O43567 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNF13O43567 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RNF13O43567 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms