Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
ATP2A1O14983 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2A1O14983 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP2A1O14983 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
ATP2A1O14983 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP2A1O14983 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
ATP2A1O14983 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP2A1O14983 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP2A1O14983 AC104819.1-201ENST00000504587 486 ntBASIC21.13■□□□□ 0.97
ATP2A1O14983 KRT18P31-201ENST00000506277 1292 ntBASIC21.13■□□□□ 0.97
ATP2A1O14983 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 AC091304.2-201ENST00000564639 760 ntBASIC21.13■□□□□ 0.97
ATP2A1O14983 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP2A1O14983 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP2A1O14983 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP2A1O14983 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC21.13■□□□□ 0.97
ATP2A1O14983 AL732292.2-201ENST00000609649 430 ntBASIC21.13■□□□□ 0.97
ATP2A1O14983 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 GXYLT1P4-201ENST00000613576 1192 ntBASIC21.13■□□□□ 0.97
ATP2A1O14983 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP2A1O14983 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.13■□□□□ 0.97
ATP2A1O14983 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP2A1O14983 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.13■□□□□ 0.97
ATP2A1O14983 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ATP2A1O14983 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
ATP2A1O14983 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
ATP2A1O14983 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP2A1O14983 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP2A1O14983 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP2A1O14983 FOSL1P1-201ENST00000511041 816 ntBASIC21.12■□□□□ 0.97
ATP2A1O14983 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC21.12■□□□□ 0.97
ATP2A1O14983 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC21.12■□□□□ 0.97
ATP2A1O14983 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP2A1O14983 Z69720.1-201ENST00000601483 472 ntBASIC21.12■□□□□ 0.97
ATP2A1O14983 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.12■□□□□ 0.97
ATP2A1O14983 AL353801.3-201ENST00000609898 542 ntBASIC21.12■□□□□ 0.97
ATP2A1O14983 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ATP2A1O14983 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP2A1O14983 AC138932.1-201ENST00000534164 6830 ntBASIC21.11■□□□□ 0.97
ATP2A1O14983 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC21.11■□□□□ 0.97
ATP2A1O14983 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATP2A1O14983 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
ATP2A1O14983 MIR149-201ENST00000384879 89 ntBASIC21.11■□□□□ 0.97
ATP2A1O14983 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP2A1O14983 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.11■□□□□ 0.97
ATP2A1O14983 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 AC124864.1-201ENST00000623408 392 ntBASIC21.11■□□□□ 0.97
ATP2A1O14983 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
ATP2A1O14983 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.11■□□□□ 0.97
ATP2A1O14983 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC21.11■□□□□ 0.97
ATP2A1O14983 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
ATP2A1O14983 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
ATP2A1O14983 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ATP2A1O14983 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
ATP2A1O14983 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
ATP2A1O14983 AC074051.2-201ENST00000565115 352 ntBASIC21.1■□□□□ 0.97
ATP2A1O14983 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.1■□□□□ 0.97
ATP2A1O14983 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC21.1■□□□□ 0.97
ATP2A1O14983 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms