Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.36■□□□□ 0.21
NPIPB4C9JG80 AL596275.1-201ENST00000423464 877 ntBASIC16.36■□□□□ 0.21
NPIPB4C9JG80 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 SEC1P-202ENST00000473944 940 ntBASIC16.36■□□□□ 0.21
NPIPB4C9JG80 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.36■□□□□ 0.21
NPIPB4C9JG80 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 KRT18P22-201ENST00000402024 1347 ntBASIC16.35■□□□□ 0.21
NPIPB4C9JG80 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.35■□□□□ 0.21
NPIPB4C9JG80 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 PHGDH-209ENST00000641074 1780 ntBASIC16.34■□□□□ 0.21
NPIPB4C9JG80 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 AC138028.4-201ENST00000564984 1845 ntBASIC16.34■□□□□ 0.21
NPIPB4C9JG80 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 ECEL1P3-201ENST00000427961 737 ntBASIC16.34■□□□□ 0.21
NPIPB4C9JG80 AC009947.2-201ENST00000444014 672 ntBASIC16.34■□□□□ 0.21
NPIPB4C9JG80 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 AC008687.5-201ENST00000593746 558 ntBASIC16.34■□□□□ 0.21
NPIPB4C9JG80 AC145285.6-201ENST00000604632 637 ntBASIC16.34■□□□□ 0.21
NPIPB4C9JG80 CLN6-221ENST00000637494 765 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NPIPB4C9JG80 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB4C9JG80 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.33■□□□□ 0.21
NPIPB4C9JG80 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.33■□□□□ 0.21
NPIPB4C9JG80 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
NPIPB4C9JG80 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NPIPB4C9JG80 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 GAD2-202ENST00000376248 680 ntTSL 5 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NPIPB4C9JG80 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms