Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AL163051.1-201ENST00000569214 1512 ntBASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AP000593.1-201ENST00000393668 712 ntBASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AC246785.2-201ENST00000432512 513 ntBASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AC074051.2-201ENST00000565115 352 ntBASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 Z69720.1-201ENST00000601483 472 ntBASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 AL161938.1-201ENST00000569833 2180 ntBASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TBC1D3BA6NDS4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 AC138932.1-201ENST00000534164 6830 ntBASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 AL353692.3-201ENST00000407031 1396 ntBASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TBC1D3BA6NDS4 LINC00167-201ENST00000530583 1419 ntBASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 AC233702.3-201ENST00000578656 1387 ntBASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 AL592071.1-201ENST00000611956 408 ntBASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TBC1D3BA6NDS4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 KRT89P-201ENST00000620027 1478 ntBASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 EMBP1-201ENST00000458200 901 ntBASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 KRT18P31-201ENST00000506277 1292 ntBASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 KRT18P41-201ENST00000518924 1277 ntBASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 AC138894.3-201ENST00000603787 634 ntBASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TBC1D3BA6NDS4 AL049812.1-201ENST00000432563 2267 ntBASIC18.72■□□□□ 0.59
TBC1D3BA6NDS4 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms