Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 KRT16P1-201ENST00000399124 1418 ntBASIC18.51■□□□□ 0.55
CCDC189A1A4V9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 AC004951.3-201ENST00000418645 1148 ntBASIC18.51■□□□□ 0.55
CCDC189A1A4V9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 AC006058.3-201ENST00000606217 1069 ntBASIC18.51■□□□□ 0.55
CCDC189A1A4V9 AL031985.4-201ENST00000642138 673 ntBASIC18.51■□□□□ 0.55
CCDC189A1A4V9 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CCDC189A1A4V9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 HTR7P1-201ENST00000538670 1336 ntBASIC18.5■□□□□ 0.55
CCDC189A1A4V9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CCDC189A1A4V9 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 AC135776.1-201ENST00000319817 2481 ntBASIC18.49■□□□□ 0.55
CCDC189A1A4V9 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 AL162741.1-201ENST00000565563 1558 ntBASIC18.49■□□□□ 0.55
CCDC189A1A4V9 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CCDC189A1A4V9 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms