Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AP001412.1-201ENST00000608405 714 ntBASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GCSHP5-201ENST00000443090 522 ntBASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 F2R-202ENST00000505600 442 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SPIB-206ENST00000596074 847 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 IRX1P1-201ENST00000438849 1838 ntBASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC13.13□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 RARRES2P10-201ENST00000564312 460 ntBASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ZNF815P-204ENST00000434898 1737 ntBASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.12□□□□□ -0.31
TRAV8-3A0A0A6YYJ7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms